b.limour.top/source/_posts/生存数据计算c指数并进行比较.md

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title: 生存数据计算C指数并进行比较 tags: [] id: '1993' categories:

• - uncategorized date: 2022-08-20 01:34:13 ---

安装补充包

• conda activate ggsurvplot
• conda install -c bioconda bioconductor-survcomp -y

计算C指数

library(survcomp)
C_index1 <- concordance.index(x=test_data$GS, surv.time=test_data$time, surv.event=test_data$status, method="noether")
C_index2 <- concordance.index(x=test_data$T, surv.time=test_data$time, surv.event=test_data$status, method="noether")
C_index3 <- concordance.index(x=test_data$Risk_Score_Ridge, surv.time=test_data$time, surv.event=test_data$status, method="noether")

比较C指数

cindex.comp(C_index1, C_index3)
cindex.comp(C_index2, C_index3)