 German Tischler-Höhle
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4b047e3e7b
Remove unneeded files
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3 years ago |
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German Tischler-Höhle
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9b4949afa3
Remove unneeded files
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3 years ago |
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German Tischler-Höhle
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d618999f11
Filter out SQ lines from file A in bamauxmerge (allow mapped query name sorted input as A file)
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3 years ago |
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German Tischler-Höhle
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c8c973d4ae
Fix Makefile
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3 years ago |
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German Tischler-Höhle
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ee22baf110
Merge experimental branch into master branch
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3 years ago |
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German Tischler-Höhle
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6e15c690fb
bump version after
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3 years ago |
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German Tischler-Höhle
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64b1070469
Make numerical index update more verbose
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3 years ago |
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German Tischler-Höhle
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68ce50cb81
bump version after
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4 years ago |
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German Tischler-Höhle
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6ddc25c8d6
Simplify/cleanup bamaddne
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4 years ago |
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German Tischler-Höhle
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233b0ce49a
Add bamaddne
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4 years ago |
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German Tischler-Höhle
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9e40882511
bump libmaus2 version
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4 years ago |
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German Tischler-Höhle
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6bfee8b97c
Remove two unnecessary include statements of InputOutputStreamInstance
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4 years ago |
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German Tischler-Höhle
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f2435c7546
Merge experimental branch into master branch
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4 years ago |
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German Tischler-Höhle
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1dcca8e547
Add shell flags in release.sh
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4 years ago |
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German Tischler-Höhle
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8876dad74e
Merge
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4 years ago |
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German Tischler-Höhle
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4a4ab7d608
Merge experimental branch into master branch
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4 years ago |
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German Tischler-Höhle
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0362f20a0b
No change version bump for versioning cleanup
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4 years ago |
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German Tischler-Höhle
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2f0eb59a93
Merge branch 'master' of gitlab.com:german.tischler/biobambam2
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4 years ago |
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German Tischler-Höhle
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a32f15e757
Merge experimental branch into master branch
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4 years ago |
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German Tischler-Höhle
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edd49224a1
bump version after
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4 years ago |
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German Tischler-Höhle
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14c7cabfab
bump libmaus2 version
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4 years ago |
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German Tischler-Höhle
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2ecfe83d39
Adapt UpdateNumericalIndex to new libmaus2 api
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4 years ago |
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German Tischler-Höhle
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1e2ca3737c
Fix output of orphaned read 2 instances in bamtofastq when splitting by readgroup
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4 years ago |
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German Tischler-Höhle
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0d7045ec88
Revert "Fix output of orphaned read 2 instances in bamtofastq when splitting by readgroup"
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4 years ago |
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German Tischler-Höhle
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5f28c2f0dc
Fix output of orphaned read 2 instances in bamtofastq when splitting by readgroup
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4 years ago |
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German Tischler-Höhle
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a2d6f9562c
Whitespace cleanup
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4 years ago |
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German Tischler-Höhle
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10ed884fe1
Whitespace cleanup
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4 years ago |
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German Tischler-Höhle
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2cb1dd06ca
bump libmaus2 version
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4 years ago |
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German Tischler-Höhle
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f985d4f828
Remove references to non functional IRODS interface in libmaus2
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4 years ago |
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German Tischler-Höhle
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6eaa26664e
Fix compilation of blastnxmltobam
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4 years ago |
