biobambam2/.gitignore

*.o
*~
INSTALL
Makefile.in
aclocal.m4
autom4te.cache
config.guess
config.h.in
config.sub
configure
depcomp
doconfig.sh
doconfig32.sh
install-sh
ltmain.sh
missing
recomp.sh
src/Makefile.in
Makefile
compile
config.h
config.log
config.status
doconfig48.sh
doconfig49.sh
libtool
m4/libtool.m4
m4/ltoptions.m4
m4/ltsugar.m4
m4/ltversion.m4
m4/lt~obsolete.m4
maccombined.sh
src/.deps/
stamp-h1
src/bam[a-zA-Z1-9]*
src/kmerprob
src/fastqtobam
src/normalisefasta
src/fastabgzfextract
src/fastaexplod
test/*.log
test/*.trs
src/*/.deps
src/*/.dirstamp
*.fq
*.fa
*.bam
src/blastnxmltobam
test/.deps
test-driver
src/biobambam2/BamBamConfig.hpp
src/fastqtobampar
src/lasToBAM
pull.sh
test/bamcmp
test/bamtosam
src/filtersam
numproc.sh
src/fastqtobam2
bumprun.sh
src/vcffilterinfo
src/vcfpatchcontigprepend
src/populaterefcache
src/vcfconcat
src/vcfsort
removespace.sh
src/filtergtf
src/vcfreplacecontigs
src/vcffiltersamples
src/vcfdiff
src/vcffilterfilterflags
src/vcfreplacecontigsmap
src/fastaselectreg
src/bamdifference