# 通过conda安装纯净环境的CellTypist

- conda create -n celltypist -c conda-forge r-base=4.1.2
- conda activate celltypist
- conda install -c conda-forge r-seurat=4.1.0 -y
- conda install -c conda-forge r-irkernel=1.3 -y
- IRkernel::installspec(name=’celltypist’, displayname=’r-celltypist’)
- conda install -c conda-forge scanpy=1.8.2 -y
- /opt/conda/envs/celltypist/bin/pip3 install celltypist -i https://pypi.tuna.tsinghua.edu.cn/simple
- conda install -c conda-forge r-reticulate=1.24 -y
- python3
- import celltypist
- celltypist.models.download_models(force_update = False)

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通过conda安装纯净环境的CellTypist
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Author
Limour
Posted on
February 22, 2022
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