scVelo运行2: 计算绘图 计算123456789scv.pp.moments(adata, n_pcs=30, n_neighbors=30)scv.tl.recover_dynamics(adata, n_jobs=8)scv.tl.velocity(adata, mode='dynamical')scv.tl.velocity_graph(adata, n_jobs=8)adata.write('hPB003.h5ad') 绘图123from matplotlib.pyplot import rc_contextwith rc_context({'figure.figsize': (12, 12)}): scv.pl.velocity_embedding_stream(adata, basis='umap', color=['cell_type_fig3'], save = "hPB003 velocity embedding stream.svg") 生信 拟时序 scVelo运行2: 计算绘图 https://occdn.limour.top/1817.html Author Limour Posted on May 8, 2022 Licensed under 通过conda安装纯净环境的ggsurvplot Previous scVelo运行1: 合并数据 Next Please enable JavaScript to view the comments