occdn.limour.top/source/_posts/jupyter-docker-stacks-进阶配置.md

---

title: Jupyter Docker Stacks 进阶配置 tags: [] id: '1532' categories:

• - 环境
• - 生信 date: 2022-02-22 19:37:06 ---

第一步 开启代码提示

pip3 install -i http://pypi.douban.com/simple --trusted-host pypi.douban.com jupyter_contrib_nbextensions
jupyter contrib nbextension install --user
pip3 install -i http://pypi.douban.com/simple --trusted-host pypi.douban.com  jupyter_nbextensions_configurator
jupyter nbextensions_configurator enable --user
pip3 install nbconvert==5.6.1 -i http://pypi.douban.com/simple --trusted-host pypi.douban.com

第二步 给conda换清华源

https://mirror.tuna.tsinghua.edu.cn/help/anaconda/

第三步 创建.Rprofile 写入以下内容

options(BioC_mirror="https://mirrors.tuna.tsinghua.edu.cn/bioconductor")
options(CRAN="http://mirrors.tuna.tsinghua.edu.cn/CRAN/")
options(repr.plot.width=12, repr.plot.height=12)
options(ggrepel.max.overlaps = Inf)
Sys.setenv(R_REMOTES_NO_ERRORS_FROM_WARNINGS=TRUE)