occdn.limour.top/source/_posts/快速开始：jupyter-docker-stacks.md

---

title: 快速开始：Jupyter Docker Stacks tags: [] id: '1530' categories:

• - 环境
• - 生信 date: 2022-02-22 19:22:15 ---

https://hub.docker.com/r/jupyter/datascience-notebook/tags

第一步 拉取 Jupyter Docker Stacks

docker pull jupyter/datascience-notebook:r-4.1.2

第二步 编写自动内网穿透脚本

#!/usr/bin/sh
HOME=/home/jovyan
nohup $HOME/dev/frp_0.38.0_linux_amd64/frpc -c $HOME/etc/frpc.ini > $HOME/log/frp.log 2>&1 &

第三步 编写docker启动脚本

• 初次启动

  #!/bin/sh
  docker run -d -p 57002:8888 --name jupyterR \
  --restart always \
  -m 60416M --memory-swap -1 \
  -c 1024 \
  --cpus 16 \
  -v /home/gene/upload:/home/jovyan/upload \
  -v /home/gene/zl_liu/jupytera/before-notebook.d:/usr/local/bin/before-notebook.d \
  -v /home/gene/zl_liu/jupytera/dev:/home/jovyan/dev \
  -v /home/gene/zl_liu/jupytera/etc:/home/jovyan/etc \
  -v /home/gene/zl_liu/jupytera/log:/home/jovyan/log \
  -v /home/gene/zl_liu/jupytera:/home/jovyan/old \
  jupyter/datascience-notebook:r-4.1.2 \
  start-notebook.sh --NotebookApp.token='***'
  

• 备份opt文件夹

  # 主机上
  mkdir ~/upload/zl_liu
  chmod 777 ~/upload/zl_liu/
  
  # docker里
  cp -r /opt ~/upload/zl_liu/
  

• 后续启动

  #!/bin/sh
  docker run -d -p 57002:8888 --name jupyterR \
  --restart always \
  -m 60416M --memory-swap -1 \
  -c 1024 \
  --cpus 16 \
  -v /home/gene/upload:/home/jovyan/upload \
  -v /home/gene/zl_liu/jupytera/before-notebook.d:/usr/local/bin/before-notebook.d \
  -v /home/gene/zl_liu/jupytera/dev:/home/jovyan/dev \
  -v /home/gene/zl_liu/jupytera/etc:/home/jovyan/etc \
  -v /home/gene/zl_liu/jupytera/log:/home/jovyan/log \
  -v /home/gene/upload/zl_liu/opt:/opt \
  jupyter/datascience-notebook:r-4.1.2 \
  start-notebook.sh --NotebookApp.token='***'