occdn.limour.top/source/_posts/通过conda安装纯净环境的infercnv.md

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title: 通过conda安装纯净环境的inferCNV tags: [] id: '1579' categories:

• - 染色体变异
• - 样本比较
• - 注释
• • 生信 date: 2022-02-28 22:30:39 ---

• conda create -n rinferCNV -c conda-forge r-base=4.1.2 -y

• conda activate rinferCNV

• conda install -c conda-forge r-seurat=4.1.0 -y

• conda install -c conda-forge r-irkernel=1.3 -y

• conda install -c conda-forge jags=4.3.0 -y

• conda install -c conda-forge r-rjags=4_12 -y

• conda install -c conda-forge python=3.9.10 -y

• conda install -c conda-forge r-biocmanager=1.30.16 -y

• BiocManager::install("infercnv")

• IRkernel::installspec(name='rinferCNV', displayname='r-inferCNV')

• https://github.com/harbourlab/uphyloplot2

• unzip uphyloplot2-master.zip