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  113. TCGA突变数据使用记录(一)
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  118. 数据下载,从cBioPortal 从cBioPortal找到相应的数据,并从github下载 ~&#x2F;dev&#x2F;xray&#x2F;xray -c ~&#x2F;etc&#x2F;xui2.json &amp; wget -e “https_proxy&#x3D;http://127.0.0.1:20809“ https://github.com/cBioPortal/datahub
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  125. 2022-09-04
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  143. 蛋白质组学TCPA数据集使用记录
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  148. 获取数据 进入TCPA的下载页面选择感兴趣的L4数据 unzip TCGA-PRAD-L4.zip 清洗数据f_dedup_IQR 123456tcpa &lt;- read.csv(&#x27;tmp/TCGA-PRAD-L4.csv&#x27;)type &lt;- as.numeric(substr(tcpa$Sample_ID, 14, 15))tcpa &lt;- subset(tcp
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  173. oncoPredict包进行药物敏感性预测
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  178. 安装包 conda create -n oncoPredict -c conda-forge r-base&#x3D;4.1.3 conda activate oncoPredict conda install -c conda-forge r-tidyverse -y conda install -c conda-forge r-irkernel -y Rscript -e “IRkernel:
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  203. Cmap药物数据库使用记录
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  208. Connectivity Map(Cmap)为一个基因表达数据库,由哈佛、剑桥大学和麻省理工学院研究人员构建,利用不同干扰物(包括小分子)处理人类细胞后的基因表达差异,建立一个干扰物、基因表达和疾病相互关联的生物应用数据库。研究团队认为以基因表达谱所建立的基因、疾病与药物的关联性,可协助研究者在药物研发领域上,快速利用基因表达谱数据比对出与疾病高相关性的药物、推论大部分药物分子的主要结构,并能够归
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  214. <time datetime="2022-09-03 16:59" pubdate>
  215. 2022-09-03
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  232. <a href="/2003.html" target="_self">
  233. 通过UCSC下载TCGA甲基化数据
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  236. <a class="index-excerpt index-excerpt__noimg" href="/2003.html" target="_self">
  237. <div>
  238. UCSC Xena是一个集分析、可视化、数据集下载等功能的在线数据分析和可视化平台。 现有142个队列的1604个公共数据集包括TCGA, ICGC, TARGET, GTEx, CCLE等,不同的数据集之间精不同的标准化方法可以相互比较。(陈浩) 选择数据集 下载数据 ~&#x2F;dev&#x2F;xray&#x2F;xray -c ~&#x2F;etc&#x2F;xui2.json &am
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  245. 2022-09-03
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  262. <a href="/2002.html" target="_self">
  263. 分享壁纸一张,测试一下图床接口
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  274. 2022-09-03
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  291. <a href="/2001.html" target="_self">
  292. ReactomePA试用
  293. </a>
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  295. <a class="index-excerpt index-excerpt__noimg" href="/2001.html" target="_self">
  296. <div>
  297. 安装补充包 conda activate clusterprofiler ~&#x2F;dev&#x2F;xray&#x2F;xray -c ~&#x2F;etc&#x2F;xui2.json &amp; wget -e “https_proxy&#x3D;http://127.0.0.1:20809“ https://github.com/YuLab-SMU/ReactomePA/archive
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  322. 让NPM面板只允许CDN回源IP访问
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  327. 之前用docker安装NPM面板,并套上了CF的免费CDN,做好了规则防护。现在还差一个防止通过固定Hostname然后扫描全网ip来反查源站的保护。 123456789101112131415161718#!/bin/bash/usr/sbin/iptables -I DOCKER-USER -p tcp -m multiport --dports 80,443 -j DROP/usr/sbi
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  334. 2022-09-02
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  351. <a href="/1999.html" target="_self">
  352. Docker安装A面板
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  357. 之前安装了X面板,现在在客户端上安装A面板来使用它 1234567891011121314version: &#x27;3.3&#x27;services: v2raya: restart: always privileged: true network_mode: host container_name: v2raya
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