Makefile.am 904 B

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  1. TESTS=\
  2. testfastqbamloop.sh \
  3. testshortsortcoordinate.sh \
  4. testshortsortqueryname.sh \
  5. testshortsort.sh \
  6. testdupsingle.sh \
  7. testdupsinglemarkedsortedqreset.sh
  8. TEST_ENVIRONMENT=
  9. LOG_COMPILER=/bin/bash
  10. EXTRA_DIST= dupsingle.sh dupsinglemarked.sh sorttestshort.sh dupsinglemarkedsortedqreset.sh \
  11. testfastqbamloop.sh testshortsortcoordinate.sh testshortsortqueryname.sh testshortsort.sh testdupsingle.sh \
  12. testdupsinglemarkedsortedqreset.sh base64decode.sh #
  13. check_PROGRAMS=bamcmp bamtosam
  14. bamcmp_SOURCES = bamcmp.cpp
  15. bamcmp_LDADD = ${LIBMAUS2LIBS}
  16. bamcmp_LDFLAGS = ${AM_CPPFLAGS} ${LIBMAUS2CPPFLAGS} ${LIBMAUS2LDFLAGS} ${AM_LDFLAGS}
  17. bamcmp_CPPFLAGS = ${AM_CPPFLAGS} ${LIBMAUS2CPPFLAGS}
  18. bamtosam_SOURCES = bamtosam.cpp
  19. bamtosam_LDADD = ${LIBMAUS2LIBS}
  20. bamtosam_LDFLAGS = ${AM_CPPFLAGS} ${LIBMAUS2CPPFLAGS} ${LIBMAUS2LDFLAGS} ${AM_LDFLAGS}
  21. bamtosam_CPPFLAGS = ${AM_CPPFLAGS} ${LIBMAUS2CPPFLAGS}