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  143. <div class="row mx-auto index-card">
  144. <div class="col-12 col-md-4 m-auto index-img">
  145. <a href="/cong-cha-yi-ji-yin-dao-RRA-ju-he" target="_self">
  146. <img src="https://api.limour.top/randomImg?d=2022-07-22 18:46:32" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】从差异基因到RRA聚合">
  147. </a>
  148. </div>
  149. <article class="col-12 col-md-8 mx-auto index-info">
  150. <h2 class="index-header">
  151. <a href="/cong-cha-yi-ji-yin-dao-RRA-ju-he" target="_self">
  152. 【迁移】从差异基因到RRA聚合
  153. </a>
  154. </h2>
  155. <a class="index-excerpt " href="/cong-cha-yi-ji-yin-dao-RRA-ju-he" target="_self">
  156. <div>
  157. 通过比对,我们得到了counts矩阵,接下来可以进行DEGs分析。此时如果我们有多组之间的对比,则可以使用RRA算法来聚合我们的结果。 RRA的安装 1234567891011121314151617181920conda create -n tcga -c conda-forge r-base=4.1.2 -yconda activate tcgaconda install -c conda-f
  158. </div>
  159. </a>
  160. <div class="index-btm post-metas">
  161. <div class="post-meta mr-3">
  162. <i class="iconfont icon-date"></i>
  163. <time datetime="2022-07-22 18:46" pubdate>
  164. 2022-07-22
  165. </time>
  166. </div>
  167. <div class="post-meta">
  168. <i class="iconfont icon-tags"></i>
  169. <a href="/tags/DEGs/">#DEGs</a>
  170. <a href="/tags/RRA/">#RRA</a>
  171. </div>
  172. </div>
  173. </article>
  174. </div>
  175. <div class="row mx-auto index-card">
  176. <div class="col-12 col-md-4 m-auto index-img">
  177. <a href="/Forest-plot-displays-the-results-of-regression-analysis" target="_self">
  178. <img src="https://api.limour.top/randomImg?d=2022-07-15 20:42:25" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】森林图展示回归分析的结果">
  179. </a>
  180. </div>
  181. <article class="col-12 col-md-8 mx-auto index-info">
  182. <h2 class="index-header">
  183. <a href="/Forest-plot-displays-the-results-of-regression-analysis" target="_self">
  184. 【迁移】森林图展示回归分析的结果
  185. </a>
  186. </h2>
  187. <a class="index-excerpt " href="/Forest-plot-displays-the-results-of-regression-analysis" target="_self">
  188. <div>
  189. 配置环境 基础编程环境 GitHub 下载加速 可能需要用到的加速服务 1234conda create -n forestplot -c conda-forge r-forestplot -yconda activate forestplotconda install -c conda-forge r-tidyverse r-irkernel -yRscript -e &quot;IRker
  190. </div>
  191. </a>
  192. <div class="index-btm post-metas">
  193. <div class="post-meta mr-3">
  194. <i class="iconfont icon-date"></i>
  195. <time datetime="2022-07-15 20:42" pubdate>
  196. 2022-07-15
  197. </time>
  198. </div>
  199. <div class="post-meta">
  200. <i class="iconfont icon-tags"></i>
  201. <a href="/tags/forestplot/">#forestplot</a>
  202. <a href="/tags/regression/">#regression</a>
  203. </div>
  204. </div>
  205. </article>
  206. </div>
  207. <div class="row mx-auto index-card">
  208. <div class="col-12 col-md-4 m-auto index-img">
  209. <a href="/Rclone-aria2-zuo-Onedrive-li-xian-xia-zai-ji" target="_self">
  210. <img src="https://api.limour.top/randomImg?d=2022-07-13 17:12:52" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】树莓派:Rclone+aria2做Onedrive离线下载机">
  211. </a>
  212. </div>
  213. <article class="col-12 col-md-8 mx-auto index-info">
  214. <h2 class="index-header">
  215. <a href="/Rclone-aria2-zuo-Onedrive-li-xian-xia-zai-ji" target="_self">
  216. 【迁移】树莓派:Rclone+aria2做Onedrive离线下载机
  217. </a>
  218. </h2>
  219. <a class="index-excerpt " href="/Rclone-aria2-zuo-Onedrive-li-xian-xia-zai-ji" target="_self">
  220. <div>
  221. Rclone使用自建应用挂上了Ondrive,接下来就该配置aria2+自动上传脚本了。 安装aira2 12345678910111213141516171819202122232425262728293031323334version: &quot;3.8&quot;services: Aria2-Pro: container_name: aria2-pro image: p3t
  222. </div>
  223. </a>
  224. <div class="index-btm post-metas">
  225. <div class="post-meta mr-3">
  226. <i class="iconfont icon-date"></i>
  227. <time datetime="2022-07-13 17:12" pubdate>
  228. 2022-07-13
  229. </time>
  230. </div>
  231. <div class="post-meta">
  232. <i class="iconfont icon-tags"></i>
  233. <a href="/tags/raspberrypi/">#raspberrypi</a>
  234. <a href="/tags/rclone/">#rclone</a>
  235. <a href="/tags/aria2/">#aria2</a>
  236. </div>
  237. </div>
  238. </article>
  239. </div>
  240. <div class="row mx-auto index-card">
  241. <div class="col-12 col-md-4 m-auto index-img">
  242. <a href="/-qian-yi--shi-kong-tu--yi-tian-lang-xing-dan-cheng-l-xing-wei-li" target="_self">
  243. <img src="https://api.limour.top/randomImg?d=2022-07-05 17:28:03" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】时空图:以天狼星单程旅行为例">
  244. </a>
  245. </div>
  246. <article class="col-12 col-md-8 mx-auto index-info">
  247. <h2 class="index-header">
  248. <a href="/-qian-yi--shi-kong-tu--yi-tian-lang-xing-dan-cheng-l-xing-wei-li" target="_self">
  249. 【迁移】时空图:以天狼星单程旅行为例
  250. </a>
  251. </h2>
  252. <a class="index-excerpt " href="/-qian-yi--shi-kong-tu--yi-tian-lang-xing-dan-cheng-l-xing-wei-li" target="_self">
  253. <div>
  254. 最近看《从一到无穷大》,对里面的闵氏时空图很感兴趣,恰好里面有去天狼星的例子,因此想用时空图画画看。为简化问题,这里取天狼星到地球的距离为9光年,实际约为8.6光年。同时为了便于画图,纵轴时间轴以年×光速为单位,横轴空间轴以光年为单位。使用 geogebra 进行绘图。 出发前的时空图 如图1所示,线段g(CAD)表示飞船,A点为质心。直线f表示天狼星B的世界线。射线h(AE)表示A的光锥。射线
  255. </div>
  256. </a>
  257. <div class="index-btm post-metas">
  258. <div class="post-meta mr-3">
  259. <i class="iconfont icon-date"></i>
  260. <time datetime="2022-07-05 17:28" pubdate>
  261. 2022-07-05
  262. </time>
  263. </div>
  264. <div class="post-meta">
  265. <i class="iconfont icon-tags"></i>
  266. <a href="/tags/%E6%97%B6%E7%A9%BA%E5%9B%BE/">#时空图</a>
  267. </div>
  268. </div>
  269. </article>
  270. </div>
  271. <div class="row mx-auto index-card">
  272. <div class="col-12 col-md-4 m-auto index-img">
  273. <a href="/STAR--yi-jian-jiao-ben" target="_self">
  274. <img src="https://api.limour.top/randomImg?d=2022-07-02 18:17:22" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】STAR:一键脚本">
  275. </a>
  276. </div>
  277. <article class="col-12 col-md-8 mx-auto index-info">
  278. <h2 class="index-header">
  279. <a href="/STAR--yi-jian-jiao-ben" target="_self">
  280. 【迁移】STAR:一键脚本
  281. </a>
  282. </h2>
  283. <a class="index-excerpt " href="/STAR--yi-jian-jiao-ben" target="_self">
  284. <div>
  285. 2023-09-27更新:添加了转录本计数相关内容 一些依赖 安装 biobambam 项目地址:https://gitlab.com/german.tischler/biobambam2 1conda create -n biobambam -c bioconda biobambam -y 安装 star 1234conda create -
  286. </div>
  287. </a>
  288. <div class="index-btm post-metas">
  289. <div class="post-meta mr-3">
  290. <i class="iconfont icon-date"></i>
  291. <time datetime="2022-07-02 18:17" pubdate>
  292. 2022-07-02
  293. </time>
  294. </div>
  295. <div class="post-meta">
  296. <i class="iconfont icon-tags"></i>
  297. <a href="/tags/STAR/">#STAR</a>
  298. </div>
  299. </div>
  300. </article>
  301. </div>
  302. <div class="row mx-auto index-card">
  303. <div class="col-12 col-md-4 m-auto index-img">
  304. <a href="/-qian-yi-CellTypist-zhu-shi-mian-yi-xi-bao-ya-qun" target="_self">
  305. <img src="https://api.limour.top/randomImg?d=2022-02-22 13:35:24" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】CellTypist 注释免疫细胞亚群">
  306. </a>
  307. </div>
  308. <article class="col-12 col-md-8 mx-auto index-info">
  309. <h2 class="index-header">
  310. <a href="/-qian-yi-CellTypist-zhu-shi-mian-yi-xi-bao-ya-qun" target="_self">
  311. 【迁移】CellTypist 注释免疫细胞亚群
  312. </a>
  313. </h2>
  314. <a class="index-excerpt " href="/-qian-yi-CellTypist-zhu-shi-mian-yi-xi-bao-ya-qun" target="_self">
  315. <div>
  316. 安装CellTypist并配置环境,加载所需的包,加载数据,将Seurat对象转换为scanpy对象,对每个细胞进行观察,对基因矩阵进行注释,组装AnnData对象,进行预测,并将预测结果添加到Seurat对象中。
  317. </div>
  318. </a>
  319. <div class="index-btm post-metas">
  320. <div class="post-meta mr-3">
  321. <i class="iconfont icon-date"></i>
  322. <time datetime="2022-02-22 13:35" pubdate>
  323. 2022-02-22
  324. </time>
  325. </div>
  326. <div class="post-meta">
  327. <i class="iconfont icon-tags"></i>
  328. <a href="/tags/celltypist/">#celltypist</a>
  329. <a href="/tags/%E7%94%9F%E4%BF%A1/">#生信</a>
  330. <a href="/tags/%E5%88%86%E7%BE%A4/">#分群</a>
  331. <a href="/tags/%E6%B3%A8%E9%87%8A/">#注释</a>
  332. </div>
  333. </div>
  334. </article>
  335. </div>
  336. <div class="row mx-auto index-card">
  337. <div class="col-12 col-md-4 m-auto index-img">
  338. <a href="/er-dai-ce-xu-shu-ju-chu-li-zhi-shu-ju-ge-shi-shuo-ming" target="_self">
  339. <img src="https://api.limour.top/randomImg?d=2022-01-17 11:33:15" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】二代测序数据处理之数据格式说明">
  340. </a>
  341. </div>
  342. <article class="col-12 col-md-8 mx-auto index-info">
  343. <h2 class="index-header">
  344. <a href="/er-dai-ce-xu-shu-ju-chu-li-zhi-shu-ju-ge-shi-shuo-ming" target="_self">
  345. 【迁移】二代测序数据处理之数据格式说明
  346. </a>
  347. </h2>
  348. <a class="index-excerpt " href="/er-dai-ce-xu-shu-ju-chu-li-zhi-shu-ju-ge-shi-shuo-ming" target="_self">
  349. <div>
  350. FASTA(.fa) 储存参考数据集 从零开始完整学习全基因组测序(WGS)数据分析:第2节 FASTA和FASTQ 基本单元 序列所表示的基因名:&gt;ENSMUSG00000020122ENSMUST00000138518,后可接空格表示注释前缀 具体序列信息:CCCTCCTATCATGC……GGGCCCACCTGTTCTCTGGT 基因名独占一行,序列信息为基因名后一行至下一个 &gt;
  351. </div>
  352. </a>
  353. <div class="index-btm post-metas">
  354. <div class="post-meta mr-3">
  355. <i class="iconfont icon-date"></i>
  356. <time datetime="2022-01-17 11:33" pubdate>
  357. 2022-01-17
  358. </time>
  359. </div>
  360. <div class="post-meta">
  361. <i class="iconfont icon-tags"></i>
  362. <a href="/tags/NGS/">#NGS</a>
  363. <a href="/tags/fasta/">#fasta</a>
  364. <a href="/tags/fastq/">#fastq</a>
  365. <a href="/tags/gft/">#gft</a>
  366. <a href="/tags/bam/">#bam</a>
  367. </div>
  368. </div>
  369. </article>
  370. </div>
  371. <div class="row mx-auto index-card">
  372. <div class="col-12 col-md-4 m-auto index-img">
  373. <a href="/Solving-equations-using-postfix-notation" target="_self">
  374. <img src="https://api.limour.top/randomImg?d=2024-01-19 22:41:03" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【探索】利用后缀表达式解方程">
  375. </a>
  376. </div>
  377. <article class="col-12 col-md-8 mx-auto index-info">
  378. <h2 class="index-header">
  379. <a href="/Solving-equations-using-postfix-notation" target="_self">
  380. 【探索】利用后缀表达式解方程
  381. </a>
  382. </h2>
  383. <a class="index-excerpt " href="/Solving-equations-using-postfix-notation" target="_self">
  384. <div>
  385. 这段Python代码实现了使用后缀表达式解方程的功能。它包括了一个栈类(Stack)和一个多项式类(Polynomial)。通过中缀表达式转后缀表达式的方式处理方程,最终实现了解一元一次方程的功能。代码包含了多个方法,如多项式的加法、减法、乘法、除法等操作。在解方程时,它先进行表达式的简化和转换,然后输出方程的解或者判断方程是否是一元一次方程。
  386. </div>
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  388. <div class="index-btm post-metas">
  389. <div class="post-meta mr-3">
  390. <i class="iconfont icon-date"></i>
  391. <time datetime="2020-12-12 06:41" pubdate>
  392. 2020-12-12
  393. </time>
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  396. <i class="iconfont icon-tags"></i>
  397. <a href="/tags/%E6%8E%A2%E7%B4%A2/">#探索</a>
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