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- 通过比对,我们得到了counts矩阵,接下来可以进行DEGs分析。此时如果我们有多组之间的对比,则可以使用RRA算法来聚合我们的结果。 RRA的安装 1234567891011121314151617181920conda create -n tcga -c conda-forge r-base=4.1.2 -yconda activate tcgaconda install -c conda-f
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- <a href="/Forest-plot-displays-the-results-of-regression-analysis" target="_self">
- 【迁移】森林图展示回归分析的结果
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- 配置环境 基础编程环境 GitHub 下载加速 可能需要用到的加速服务 1234conda create -n forestplot -c conda-forge r-forestplot -yconda activate forestplotconda install -c conda-forge r-tidyverse r-irkernel -yRscript -e "IRker
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- <a href="/Rclone-aria2-zuo-Onedrive-li-xian-xia-zai-ji" target="_self">
- 【迁移】树莓派:Rclone+aria2做Onedrive离线下载机
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- <a class="index-excerpt " href="/Rclone-aria2-zuo-Onedrive-li-xian-xia-zai-ji" target="_self">
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- Rclone使用自建应用挂上了Ondrive,接下来就该配置aria2+自动上传脚本了。 安装aira2 12345678910111213141516171819202122232425262728293031323334version: "3.8"services: Aria2-Pro: container_name: aria2-pro image: p3t
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- <time datetime="2022-07-13 17:12" pubdate>
- 2022-07-13
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- <img src="https://api.limour.top/randomImg?d=2022-07-05 17:28:03" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】时空图:以天狼星单程旅行为例">
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- <a href="/-qian-yi--shi-kong-tu--yi-tian-lang-xing-dan-cheng-l-xing-wei-li" target="_self">
- 【迁移】时空图:以天狼星单程旅行为例
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- <a class="index-excerpt " href="/-qian-yi--shi-kong-tu--yi-tian-lang-xing-dan-cheng-l-xing-wei-li" target="_self">
- <div>
- 最近看《从一到无穷大》,对里面的闵氏时空图很感兴趣,恰好里面有去天狼星的例子,因此想用时空图画画看。为简化问题,这里取天狼星到地球的距离为9光年,实际约为8.6光年。同时为了便于画图,纵轴时间轴以年×光速为单位,横轴空间轴以光年为单位。使用 geogebra 进行绘图。 出发前的时空图 如图1所示,线段g(CAD)表示飞船,A点为质心。直线f表示天狼星B的世界线。射线h(AE)表示A的光锥。射线
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- 2022-07-05
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- <a href="/STAR--yi-jian-jiao-ben" target="_self">
- 【迁移】STAR:一键脚本
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- </h2>
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- <a class="index-excerpt " href="/STAR--yi-jian-jiao-ben" target="_self">
- <div>
- 2023-09-27更新:添加了转录本计数相关内容 一些依赖 安装 biobambam 项目地址:https://gitlab.com/german.tischler/biobambam2 1conda create -n biobambam -c bioconda biobambam -y 安装 star 1234conda create -
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- <time datetime="2022-07-02 18:17" pubdate>
- 2022-07-02
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- <i class="iconfont icon-tags"></i>
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- <a href="/tags/STAR/">#STAR</a>
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- <a href="/-qian-yi-CellTypist-zhu-shi-mian-yi-xi-bao-ya-qun" target="_self">
- <img src="https://api.limour.top/randomImg?d=2022-02-22 13:35:24" srcset="https://jscdn.limour.top/gh/Limour-dev/Sakurairo_Vision/load_svg/inload.svg" lazyload alt="【迁移】CellTypist 注释免疫细胞亚群">
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- <h2 class="index-header">
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- <a href="/-qian-yi-CellTypist-zhu-shi-mian-yi-xi-bao-ya-qun" target="_self">
- 【迁移】CellTypist 注释免疫细胞亚群
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- </h2>
-
- <a class="index-excerpt " href="/-qian-yi-CellTypist-zhu-shi-mian-yi-xi-bao-ya-qun" target="_self">
- <div>
- 安装CellTypist并配置环境,加载所需的包,加载数据,将Seurat对象转换为scanpy对象,对每个细胞进行观察,对基因矩阵进行注释,组装AnnData对象,进行预测,并将预测结果添加到Seurat对象中。
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- <i class="iconfont icon-date"></i>
- <time datetime="2022-02-22 13:35" pubdate>
- 2022-02-22
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- <a href="/tags/celltypist/">#celltypist</a>
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- <a href="/tags/%E7%94%9F%E4%BF%A1/">#生信</a>
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- <a href="/tags/%E5%88%86%E7%BE%A4/">#分群</a>
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- <a href="/tags/%E6%B3%A8%E9%87%8A/">#注释</a>
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